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ARTICLES ET CHAPITRES D’OUVRAGES PARUS EN 2006 ARTICLES AND BOOKS CHAPTERS PUBLISHED IN 2006

Aller, P; Garnier, N; Genest, M Transmembrane helix packing of ErbB/Neu receptor in membrane environment: A molecular dynamics study J. Biomol. Struct. Dyn. (2006) 24 (3) 209-228 Asseline, U Development and applications of fluorescent oligonucleotides Curr. Org. Chem. (2006) 10 (4) 491-518 Asseline, U; Chassignol, M; Aubert, Y; Roig, V Detection of terminal mismatches on DNA duplexes with fluorescent oligonucleotides Org. Biomol. Chem. (2006) 4 (10) 1949-1957 Balogh, E; Mato-Iglesias, M; Djanashvili, K; Peters , JA; de Blas, A; Rodríguez-Blas, T; Platas-Iglesias, C; Tóth, E Pyridine and phosphonate containing acyclic ligands for stable lanthanide complexation. Unprecedently fast water exchange on the GdIII chelates Inorg. Chem. (2006) 45 8719-8728 Beaufour, M; Maurizot, JC; Ribet, JP; Morin, P J HPLC quantitation of the four stereoisorners of benzoxathiepin derivatives with cellulose phenyl type chiral stationary phase and circular dichroism detection Pharmaceut. Biomed. (2006) 41 (2) 544-548 Bilbille, Y; Paquet, F; Meudal, H; Giraud-Panis, MJ ; Lancelot, G NMR studies of telomeric nucleoprotein complexes involving the Myb-like domain of the human telomeric protein TRF2 CR. Chimie (2006) 9 (3-4) 452-458 Boiteux, S; Castaing, B; Radicella, PJ BER: (Base excision repair): molecular mechanisms and biological roles Biofutur (2006) (271) 35-39 Brack, A Clay minerals and the origin of life in Handbook of clay science (Ed. Bergaya, F; Theng, BKG; Lagaly, G Elsevier Science) (2006) 385-398

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Brack, A De l’origine de la vie à la vie dans l’Univers: hasard ou nécessité? Revue des questions scientifiques (2006) 177 347-380 Brack, A L'exobiologie ou l'origine chimique de la vie in Formation planétaires et exoplanètes (Ed. Halbwachs, JL; Egret, D; Hameury, JM) (2006) 309-332 Buré, C; Castaing, B; Lange, C; Delmas, AF Location and base selectivity on fragmentation of brominated oligodeoxynucleotides J. Mass Spectrom. (2006) 41 (1) 84-90 Burai, L; Tóth, E; Bazin, H; Benmelouka, M; Jászber ényi, Z; Helm, L; Merbach, AE Positively Charged GdIII Cryptates : Slow, Associative Water Exchange Dalton Trans. (2006) 629-634 Calandrini, V; Sutmann, G; Deriu, A; Kneller, GR Role of effective atomic masses in memory function-based models for liquids: A simulation study of liquid water J. Chem. Phys. (2006) 125 (23) Art No. 236102 Chefdor, F; Benedetti, H; Depierreux, C; Delmotte, F; Morabito, D; Carpin, S Osmotic stress sensing in Populus: Components identification of a phosphorelay system Febs Lett. (2006) 580 (1) 77-81 Colin, ME; Marchand, PA; Bonmatin, JM L’apiculture écologique L’écologiste (2006) 21 8 (1) 41-43 Correia, I; Ronzani, N; Platzer, N; Doan, BT; Beloe il, JC Study of a potential inhibitor of acetylcholinesterase using UV spectrophotometry, NMR spectroscopy and molecular modeling J. Phys. Org. Chem. (2006) 19 (2) 148-156 Costa, J; Balogh, E; Turcry, V; Tripier, R; Le Bacc on, M; Chuburu, F; Handel, H; Helm, L; Tóth, E; Merbach, AE Unexpected aggregation in aqueous solution of neutral, xylene-cored dinuclear GdIII chelates in aqueous solution Chem.-Eur. J. (2006) 12 (26) 6841-6851 Cremer, GA; Bureaud, N; Lelievre, D; Piller, V; Kun z, H; Piller, F; Delmas, AF Modular synthesis and immunological evaluation of MUC-derived glycoproteine antigens J. Ppet. Sci. (2006) 12100-100 Suppl. S Cremer, GA; Bureaud, N; Piller, V Kunz, H; Piller, F; Delmas, AF Synthesis and biological evaluation of a multiantigenic Tn/TF-containing glycopeptide mimic of the tumor-related MUC1 glycoprotein Chemmedchem (2006) 1 (9) 965-968

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Cremer, GA; Tariq, H; Delmas, AF Combining a polar resin and a pseudo-proline to optimize the solid-phase synthesis of a 'difficult sequence' J. Pept. Sci. (2006) 12 (6) 437-442 Da Silva, P; Landon, C; Beltoise, R; Ponchet, M; Vo velle, F Accessibility of tobacco lipid transfer protein cavity revealed by N-15 NMR relaxation studies and molecular dynamics simulations Proteins (2006) 64 (1) 124-132 Davidkova, M; Stisova, V; Goffinont, S; Gillard, N; Castaing, B; Spotheim-Maurizot, M Modification of DNA radiolysis by DNA-binding proteins: structural aspects Radiat. Prot. Dosim. (2006) 122 (1-4) 100-105 Decostaire, IP; Lelièvre, D; Zhang, HH; Delmas, AF Controlling the outcome of overacylation of N-protected aminooxyacetic acid during the synthesis of an aminooxy-peptide for chemical ligation Tetrahedron Lett. (2006) 47 (39) 7057-7060 Fajac, I; Grosse, S; Roche, AC; Monsigny, M Cystic fibrosis gene therapy: key questions and prospects Cur. Pediatric Reviews (2006) 2 (2) 99-105 Franchi, J; Crola, C; Lardin, C; Marteau, C; Mitter rand, M; Schnebert, S; Kieda, C CTACK a new pro-angiogenic factor for dermal endothelial cells J. Invest. Dermatol. (2006) 126 60-60 Suppl. 3 Freire, T; Lo-Man, R; Piller, F; Piller, V; Leclerc , C; Bay, S Enzymatic large-scale synthesis of MUC6-Tn glycoconjugates for antitumor vaccination Glycobiology (2006) 16 (5) 390-401 Goumon, Y; Muller, A; Glattard, E; Marban, C; Gasni er, C; Strub, JM; Chasserot-Golaz, S; Rohr, O; Stefano, GB; Welters, ID; Van Dorsselaer, A; Schoentgen, F; Aunis, D; Metz-Boutigue, MH Identification of morphine-6-glucuronide in chromaffin cell secretory granules J. Biol. Chem. (2006) 281 (12) 8082-8089 Gref, R; Amiel, C; Molinard, K; Daoud-Mahammed, S; Sebille, B; Gillet, B; Beloeil, JC; Ringard, C; Rosilio, V; Poupaert, J; Couvreur, P New self-assembled nanogels based on host-guest interactions: Characterization and drug loading J. Control. Release (2006) 111 (3) 316-324 Grosse, S; Thevenot, G; Monsigny, M; Fajac, I Which mechanism for nuclear import of plasmid DNA complexed with polyethylenimine derivatives? J. Gene Med. (2006) 8 (7) 845-851 Hamon, V; Calligari, P; Hinsen, K; Kneller, GR Simulation studies of structural changes and relaxation processes in lysozyme under pressure J. Non-Cryst. Solids (2006) 352 (42-49) 4417-4423

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Hardouin, J; Hubert-Roux, M; Delmas, AF; Lange, C Identification of isoenzymes using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry Rapid Commun. Mass Sp. (2006) 20 (5) 725-732 Hashizume, K; Sugihara, A; Pinti, DL; Orberger, B; Westall, F Search for primordial biogenic isotopic signatures of nitrogen in Archean sedimentary rocks Geochim. Cosmochim. Ac. (2006) 70 (18) A235-A235 Suppl. S Hébert, E Mannose-6-phosphate/insulin-like growth factor II receptor expression and tumor development Biosci. Rep. (2006) 26 (1) 7-17 Hinsen, K Comment on: "Energy landscape of a small peptide revealed by dihedral angle principal component analysis" Proteins-Structure Function And Bioinformatics (2006) 64 (3) 795-797 Hinsen, K; Langtangen, HP; Skavhaug, O; Odegard, A Using BSP and python to simplify parallel programming Future Gener. Comp. Sy (2006) 22 (1-2) 123-157 Karmakova, T; Feofanov, A; Pankratov, A; Kazachkina , N; Nazarova, A; Yakubovskaya, R; Lebedeva, V; Ruziyev, R; Mironov, A; Maurizot, JC; Vigny, P Tissue distribution and in vivo photosensitizing activity of 13,15-[N-(3-hydroxypropyl)]cycloimide chlorin p6 and 13,15-(N-methoxy)cycloimide chlorin p6 methyl ester J. Photoch. Photobio. B (2006) 82 (1) 28-36 Kieda, C; Nathalie, LF; Claire, CDS Chemokine-glycosaminoglycan interactions participate to the endothelium organospecificity and cellular addressing Glycobiology (2006) 16 (11) 1157-1157 Art No. 278 Kieken, F; Paquet, F; Brule, F; Paoletti, J; Lancel ot, G A new NMR solution structure of the SL1 HIV-1(Lai) loop-loop dimer Nucleic Acids Res. (2006) 34 (1) 343-352 Kneller, GR Hamiltonian formalism for semiflexible molecules in Cartesian coordinates J. Chem. Phys. (2006) 125 (11) Art No. 114107 Kneller, GR; Calligari, P Efficient characterization of protein secondary structure in terms of screw motions Acta Crystallogr. D (2006) 62 302-311 Part 3 Kocanova, S; Hornakova, T; Hritz, J; Jancura, D; Ch orvat, D; Mateasik, A; Ulicny, J; Refregiers, M; Maurizot, JC; Miskovsky, P Characterization of the interaction of hypericin with protein kinase C in U-87 MG human glioma cells Photochem. Photobiol. (2006) 82 (3) 720-728

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Landon, C; Meudal, H; Boulanger, N; Bulet, P; Stock lin, R; Vovelle, F Solution structures of stomoxyn and spinigerin, two antimicrobial peptides from insects in Understanding biology using peptides, 19th American Peptide Symposium (Ed. Blondelle, SE) (2006) 289-290 Landon, C; Meudal, H; Boulanger, N; Bulet, P; Vovel le, F Solution structures of stomoxyn and spinigerin, two insect antimicrobial peptides with an α-helical conformation Biopolymers (2006) 81 (2) 92-103 Lartia, R; Asseline, U New cyanine-oligonucleotide conjugates: Relationships between chemical structures and properties Chem.-Eur. J. (2006) 12 (8) 2270-2281 Leach, S; Bernstein, M; Westall, F; Lunine, JI; Wal lis, M; Matthews, CN; Ferris, JP Prebiotic materials from on and off the early Earth – Discussion Philos. T. Roy. Soc. B (2006) 361 (1474) 1700-1702 Lebdušková, P; Sour, A; Helm, L; Tóth, E; Kotek, J; Lukeš, I; Merbach, AE Phosphinic derivative of DTPA conjugated to a G5 PAMAM dendrimer: an 17O and 1H relaxometric study of its Gd(III) complex Dalton Trans. (2006) 3399-3406 Lenain, C;Bauwens, S; Amiard, S; Brunori, M; Giraud -Panis, MJ; Gilson, E The Apollo 5' exonuclease functions together with TRF2 to protect telomeres from DNA repair Curr. Biol. (2006) 16 (13) 1303-1310 Livramento, JB; Sour, A; Borel, A; Merbach, AE; Tót h, E Six Gd3+ ions densely packed in a starburst-shaped heterometallic compound Chem.-Eur. J. (2006) 12 (4) 989-1003 Livramento, JB; Weidensteiner, C; Prata, MIM; Alleg rini, PR; Geraldes, CFGC; Helm, L; Kneuer, R; Merbach, AE; Santos, AC; Schmidt, P; Tót h, E First in vivo MRI assessment of a self-assembled metallostar compound endowed with a remarkable high field relaxivity Contrast Media & Molecular Imaging (2006) 1 (1) 30-40 Mato-Iglesias, M; Balogh, E; Platas-Iglesias, C; Tó th, E; de Blas, A; Rodríguez-Blas, T Pyridine and phosphonate containing acyclic ligands for stable lanthanide complexation. An experimental and theoretical study to assess solution structure of LnIII complexes Dalton Trans. (2006) 5404-5415 Matthews, CN; Kasting, JF; Canfield, DE; Westall, F Atmospheric composition and climate on the early Earth – Discussion Philos. T. Roy. Soc. B (2006) 361 (1474) 1741-1742 Mennesson, E; Erbacher, P; Kuzak, M; Kieda, C; Mido ux, P; Pichon, C DNA/cationic polymer complex attachment on a human vascular endothelial cell monolayer exposed to a steady laminar flow J. Control. Release (2006) 114 (3) 389-397

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Mockey, M; Goncalves, C; Dupuy, FP; Lemoine, FM; Pi chon, C; Midoux, P mRNA transfection of dendritic cells: Synergistic effect of ARCA mRNA capping with Poly(A) chains in cis and in trans for a high protein expression level Biochem. Bioph. Res. Co. (2006) 340 (4) 1062-1068 Monsigny, M; Duverger, E; Oruganti, S; Fajac, I; Ro che, AC Glycotargeting with synthetic glycoconjugates in Glycobiology (Ed. Scion Pub., Bloxham, UK) (2006) Monsigny, M; Roche, AC; Duverger, E; Oruganti, S Multivalent presentation: Neoglycoproteins in Comprehensive glycoscience. From chemistry to systems biology. Section d: Molecular interactions (Ed. Elsevier) (2006) Morellet, N; Meudal, H; Bouaziz, S; Roques, BP Structure of the zinc finger domain encompassing residues 13-51 of the nucleocapsid protein from simian immunodeficiency virus Biochem. J. (2006) 393 725-732 Part 3 Naveau, A; Smirnov, P; Menager, C; Gazeau, F; Cleme nt, O; Lafont, A; Gogly, B Phenotypic study of human gingival fibroblasts labeled with superparamagnetic anionic nanoparticles J. Periodontol. (2006) 77 (2) 238-247 Orberger, B; Rouchon, V; Westall, F; de Vries, ST; Pinti, DL; Wagner, C; Wirth, R; Hashizume, K Microfacies and origin of some Archean cherts (Pilbara, Australia) in South Africa processes on the Early Earth, Field Forum on Processes on the Early Earth (Ed. Reimold, WU; Gibson, RL; Reimold, WU; Gibson, RL) (2006) (405) 133-156 Orberger, B; Rouchon , V; Westall, F; De Vries, ST; Wagner, C; Pinti, DL Protoliths and micro-environments of some Archean Cherts in Processes on the Early Earth (Ed. Reimold, WU; Gibson, R) (2006) 405 133-152 Rautureau, G; Jouvensal, L; Decoville, M; Locker, D ; Vovelle, FO; Schoentgen, FO Cloning, high yield over-expression, purification, and characterization of CG18594, a new PEBP/RKIP family member from Drosophila melanogaster Protein. Expres. Purif. (2006) 48 (1) 90-97 Salvaing, J; Decoville, M; Mouchel-Vielh, E; Bussie re, M; Daulny, A; Boldyreva, L; Zhimulev, I; Locker, D; Peronnet, F Corto and DSP1 interact and bind to a maintenance element of the Scr Hox gene: understanding the role of Enhancers of trithorax and Polycomb BMC Biology (2006) 4 Art No. 9 Sharonov, GV; Karmakova, TA; Kassies, R; Pljutinska ya, AD; Grin, MA; Refregiers, M; Yakubovskaya, RI; Mironov, AF; Maurizot, JC; Vigny, P; Otto, C; Feofanov, AV Cycloimide bacteriochlorin p derivatives: Photodynamic properties and cellular and tissue distribution Free Radical Bio. Med. (2006) 40 (3) 407-419

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Smirnov, P; Gazeau, F; Beloeil, JC; Doan, BT; Wilhe lm, C; Gillet, B Single-cell detection by gradient echo 9.4 T MRI: a parametric study Contrast Media Mol. Imag. (2006) 1 (4) 165-174 Smirnov, P; Lavergne, E; Gazeau, F; Lewin, M; Boiss onnas, A; Doan, BT; Gillet, B; Combadiere, C; Combadiere, B; Clement, O In vivo cellular imaging of lymphocyte tracking by MRI: A tumor model approach to cell-based anticancer therapy Magnet. Reson. Med. (2006) 56 (3) 498-508 Stisova, V; Goffinont, S; Spotheim-Maurizot, M; Dav idkova, M Radiation damage to DNA-protein specific complexes: Estrogen response element-estrogen receptor complex Radiat. Prot. Dosim. (2006) 122 (1-4) 106-109 Stocker, A; Rossmann, A; Kettrup, A; Bengsch, ER Detection of royal jelly adulteration using carbon and nitrogen stable isotope ratio analysis Rapid Commun. Mass Spectrom. (2006) 20 (2) 181-184 Torres, S; André, JP; Martins, JA; Geraldes, CFGC; Merbach, AE; Tóth, E Supramolecular assembly of an amphiphilic GdIII chelate: tuning the reorientational correlation time and the water exchange rate Chem.-Eur. J. (2006) 12 (3) 940-948 Tournebize, R; Doan, BT; Dillies, MA; Maurin, S; Be loeil, JC; Sansonetti, PJ Magnetic resonance imaging of Klebsiella pneumoniae-induced pneumonia in mice Cell. Microbiol. (2006) 8 (1) 33-43 Vidal, C; Meric, P; Provost, F; Herzog, C; Lasmezas , C; Gillet, B; Beloeil, JC; Dormont, D Preclinical metabolic changes in mouse prion diseases detected by H-1-nuclear magnetic resonance spectroscopy Neuroreport (2006) 17 (1) 89-93 Walmacq, C; Rahmouni, AR; Boudvillain, M Testing the steric exclusion model for hexameric helicases: Substrate features that alter RNA-DNA unwinding by the transcription termination factor Rho Biochemistry (2006) 45 (18) 5885-5895 Was, H; Cichon, T; Smolarczyk, R; Rudnicka, D; Stop a, M; Chevalier, C; Leger, JJ; Lackowska, B; Grochot, A; Bojkowska, K; Ratajska, A ; Kieda, C; Szala, S; Dulak, J; Jozkowicz, A Overexpression of heme oxygenase-1 in murine melanoma - Increased proliferation and viability of tumor cells, decreased survival of mice AM. J. Pathol. (2006) 169 (6) 2181-2198 Westall, F; de Ronde, CEJ; Southam, G; Grassineau, N; Colas, M; Cockell, C; Lammer, H Implications of a 3.472-3.333 Gyr-old subaerial microbial mat from the Barberton greenstone belt, South Africa for the UV environmental conditions on the early Earth Philos. T. Roy. Soc. B (2006) 361 (1474) 1857-1875

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Westall, F; de Vries, ST; Nijman, W; Rouchon, V; Or berger, B; Pearson, V; Watson, J; Verchovsky, A; Wright, I; Rouzaud, JN; Marchesini, D; Severine, A The 3.466 Ga "Kitty's Gap Cheil," an early Archean microbial ecosystem in South Africa processes on the Early Earth, Field Forum on Processes on the Early Earth (Ed. Reimold, WU; Gibson, RL; Reimold, WU; Gibson, RL) (2006) (405) 105-131 Westall, F; Southam, G Early life on Earth in Archean geodynamics and environments (Ed. Benn, K et al. ) (2006) 164 283-304